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workflow_patterns

This document describes detailed multi-step workflows for common bioinformatics tasks using BioServices.

  • Skills
  • Scientific
  • 2

What it does and how to use it

A skill that teaches Claude Code to do scientific tasks well. It is packaged knowledge the model uses whenever it is relevant.

  1. Install the skill (command above).
  2. In Claude Code, describe what you need - the skill turns on by itself when the context fits.
  3. No commands to memorize: you talk in plain language and the skill does the rest.

Install (Claude Code)

mkdir -p .claude/skills/workflow-patterns && curl -fsSL https://doutorai.pt/data/lib/skills__workflow-patterns.md -o .claude/skills/workflow-patterns/SKILL.md

Paste this command into the terminal, in your project folder, and the component installs automatically.

Content

# BioServices: Common Workflow Patterns

This document describes detailed multi-step workflows for common bioinformatics tasks using BioServices.

## Table of Contents

1. [Complete Protein Analysis Pipeline](#complete-protein-analysis-pipeline)
2. [Pathway Discovery and Network Analysis](#pathway-discovery-and-network-analysis)
3. [Compound Multi-Database Search](#compound-multi-database-search)
4. [Batch Identifier Conversion](#batch-identifier-conversion)
5. [Gene Functional Annotation](#gene-functional-annotation)
6. [Protein Interaction Network Construction](#protein-interaction-network-c

- 🔒 Full content on the Pro plan (€7.99/month) -

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