uniprot_client

A Python client for interacting with the UniProt REST API. Provides helper functions for common operations including search, retrieval, ID mapping, and streaming.

Skills
Scientific
0

What it does and how to use it

A skill that teaches Claude Code to do scientific tasks well. It is packaged knowledge the model uses whenever it is relevant.

Install the skill (command above).
In Claude Code, describe what you need - the skill turns on by itself when the context fits.
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Install (Claude Code)

mkdir -p .claude/skills/uniprot-client && curl -fsSL https://doutorai.pt/data/lib/skills__uniprot-client.md -o .claude/skills/uniprot-client/SKILL.md

Paste this command into the terminal, in your project folder, and the component installs automatically.

Content

#!/usr/bin/env python3
"""
UniProt REST API Client

A Python client for interacting with the UniProt REST API.
Provides helper functions for common operations including search,
retrieval, ID mapping, and streaming.

Usage examples:
    # Search for proteins
    results = search_proteins("insulin AND organism_name:human", format="json")

    # Get a single protein
    protein = get_protein("P12345", format="fasta")

    # Map IDs
    mapped = map_ids(["P12345", "P04637"], from_db="UniProtKB_AC-ID", to_db="PDB")

    # Stream large results
    for batch in stream_results("taxonomy_id:9606 AND re

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