tile_extraction

Tile extraction is the process of cropping smaller, manageable regions from large whole slide images. Histolab provides three main extraction strategies, each suited for different analysis needs. All tilers share common parameters and…

Skills
Scientific
0

What it does and how to use it

A skill that teaches Claude Code to do scientific tasks well. It is packaged knowledge the model uses whenever it is relevant.

Install the skill (command above).
In Claude Code, describe what you need - the skill turns on by itself when the context fits.
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Install (Claude Code)

mkdir -p .claude/skills/tile-extraction && curl -fsSL https://doutorai.pt/data/lib/skills__tile-extraction.md -o .claude/skills/tile-extraction/SKILL.md

Paste this command into the terminal, in your project folder, and the component installs automatically.

Content

# Tile Extraction

## Overview

Tile extraction is the process of cropping smaller, manageable regions from large whole slide images. Histolab provides three main extraction strategies, each suited for different analysis needs. All tilers share common parameters and provide methods for previewing and extracting tiles.

## Common Parameters

All tiler classes accept these parameters:

```python
tile_size: tuple = (512, 512)           # Tile dimensions in pixels (width, height)
level: int = 0                          # Pyramid level for extraction (0=highest resolution)
check_tissue: bool = True

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