string_api

This module provides Python functions for interacting with the STRING database API. All functions return raw response text or JSON which can be parsed as needed.

Skills
Scientific
2

What it does and how to use it

A skill that teaches Claude Code to do scientific tasks well. It is packaged knowledge the model uses whenever it is relevant.

Install the skill (command above).
In Claude Code, describe what you need - the skill turns on by itself when the context fits.
No commands to memorize: you talk in plain language and the skill does the rest.

Install (Claude Code)

mkdir -p .claude/skills/string-api && curl -fsSL https://doutorai.pt/data/lib/skills__string-api.md -o .claude/skills/string-api/SKILL.md

Paste this command into the terminal, in your project folder, and the component installs automatically.

Content

"""
STRING Database REST API Helper Functions

This module provides Python functions for interacting with the STRING database API.
All functions return raw response text or JSON which can be parsed as needed.

API Base URL: https://string-db.org/api
Documentation: https://string-db.org/help/api/

STRING provides protein-protein interaction data from over 40 sources covering
5000+ genomes with ~59.3 million proteins and 20+ billion interactions.
"""

import urllib.request
import urllib.parse
import urllib.error
import json
from typing import Optional, List, Union, Dict


STRING_BASE_URL = "http

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