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scripts

This reference covers creating OMERO.scripts for server-side processing and batch operations.

  • Skills
  • Scientific
  • 6

What it does and how to use it

A skill that teaches Claude Code to do scientific tasks well. It is packaged knowledge the model uses whenever it is relevant.

  1. Install the skill (command above).
  2. In Claude Code, describe what you need - the skill turns on by itself when the context fits.
  3. No commands to memorize: you talk in plain language and the skill does the rest.

Install (Claude Code)

mkdir -p .claude/skills/scripts && curl -fsSL https://doutorai.pt/data/lib/skills__scripts.md -o .claude/skills/scripts/SKILL.md

Paste this command into the terminal, in your project folder, and the component installs automatically.

Content

# Scripts & Batch Operations

This reference covers creating OMERO.scripts for server-side processing and batch operations.

## OMERO.scripts Overview

OMERO.scripts are Python scripts that run on the OMERO server and can be called from OMERO clients (web, insight, CLI). They function as plugins that extend OMERO functionality.

### Key Features

- **Server-Side Execution**: Scripts run on the server, avoiding data transfer
- **Client Integration**: Callable from any OMERO client with auto-generated UI
- **Parameter Handling**: Define input parameters with validation
- **Result Reporting**: Re

- 🔒 Full content on the Pro plan (€7.99/month) -

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