python-api

Comprehensive reference for gtars Python bindings.

Skills
Scientific
2

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Content

# Python API Reference

Comprehensive reference for gtars Python bindings.

## Installation

```bash
# Install gtars Python package
uv pip install gtars

# Or with pip
pip install gtars
```

## Core Classes

### RegionSet

Manage collections of genomic intervals:

```python
import gtars

# Create from BED file
regions = gtars.RegionSet.from_bed("regions.bed")

# Create from coordinates
regions = gtars.RegionSet([
    ("chr1", 1000, 2000),
    ("chr1", 3000, 4000),
    ("chr2", 5000, 6000)
])

# Access regions
for region in regions:
    print(f"{region.chromosome}:{region.start}-{region.end}")


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