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evidence_types

Evidence represents any event or set of events that identifies a target as a potential causal gene or protein for a disease. Evidence is standardized and mapped to: - Ensembl gene IDs for targets - EFO (Experimental Factor Ontology) for…

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What it does and how to use it

A skill that teaches Claude Code to do scientific tasks well. It is packaged knowledge the model uses whenever it is relevant.

  1. Install the skill (command above).
  2. In Claude Code, describe what you need - the skill turns on by itself when the context fits.
  3. No commands to memorize: you talk in plain language and the skill does the rest.

Install (Claude Code)

mkdir -p .claude/skills/evidence-types && curl -fsSL https://doutorai.pt/data/lib/skills__evidence-types.md -o .claude/skills/evidence-types/SKILL.md

Paste this command into the terminal, in your project folder, and the component installs automatically.

Content

# Evidence Types and Data Sources

## Overview

Evidence represents any event or set of events that identifies a target as a potential causal gene or protein for a disease. Evidence is standardized and mapped to:
- **Ensembl gene IDs** for targets
- **EFO (Experimental Factor Ontology)** for diseases/phenotypes

Evidence is organized into **data types** (broader categories) and **data sources** (specific databases/studies).

## Evidence Data Types

### 1. Genetic Association

Evidence from human genetics linking genetic variants to disease phenotypes.

#### Data Sources:

**GWAS (Genome-Wide A

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