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brenda_visualization

This module provides visualization functions for BRENDA enzyme data, including kinetic parameters, environmental conditions, and pathway analysis.

  • Skills
  • Scientific
  • 0

What it does and how to use it

A skill that teaches Claude Code to do scientific tasks well. It is packaged knowledge the model uses whenever it is relevant.

  1. Install the skill (command above).
  2. In Claude Code, describe what you need - the skill turns on by itself when the context fits.
  3. No commands to memorize: you talk in plain language and the skill does the rest.

Install (Claude Code)

mkdir -p .claude/skills/brenda-visualization && curl -fsSL https://doutorai.pt/data/lib/skills__brenda-visualization.md -o .claude/skills/brenda-visualization/SKILL.md

Paste this command into the terminal, in your project folder, and the component installs automatically.

Content

"""
BRENDA Database Visualization Utilities

This module provides visualization functions for BRENDA enzyme data,
including kinetic parameters, environmental conditions, and pathway analysis.

Key features:
- Plot Km, kcat, and Vmax distributions
- Compare enzyme properties across organisms
- Visualize pH and temperature activity profiles
- Plot substrate specificity and affinity data
- Generate Michaelis-Menten curves
- Create heatmaps and correlation plots
- Support for pathway visualization

Installation:
    uv pip install matplotlib seaborn pandas numpy

Usage:
    from scripts.brenda_vis

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