api_quick_reference

This document provides quick reference for common COBRApy functions, signatures, and usage patterns.

Skills
Scientific
3

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Content

# COBRApy API Quick Reference

This document provides quick reference for common COBRApy functions, signatures, and usage patterns.

## Model I/O

### Loading Models

```python
from cobra.io import load_model, read_sbml_model, load_json_model, load_yaml_model, load_matlab_model

# Bundled test models
model = load_model("textbook")   # E. coli core metabolism
model = load_model("ecoli")      # Full E. coli iJO1366
model = load_model("salmonella") # Salmonella LT2

# From files
model = read_sbml_model(filename, f_replace={}, **kwargs)
model = load_json_model(filename)
model = load_yaml_model(fil

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